A New Means To Identify Type 3 Secreted Effectors: Functionally Interchangeable Class IB Chaperones Recognize a Conserved Sequence

Many Gram-negative bacteria utilize specialized secretion systems to inject proteins (effectors) directly into host cells. Little is known regarding how bacteria ensure that only small subsets of the thousands of proteins they encode are recognized as substrates of the secretion systems, limiting their identification through bioinformatic analyses. Many of these proteins require chaperones to direct their secretion. Here, using the newly described protein interaction platform assay, we demonstrate that type 3 secretion system class IB chaperones from one bacterium directly bind their own effectors as well as those from other species. In addition, we observe that expression of class IB homologs from seven species, including pathogens and endosymbionts, mediate the translocation of effectors from Shigella directly into host cells, demonstrating that class IB chaperones are often functionally interchangeable. Notably, class IB chaperones bind numerous effectors. However, as previously proposed, they are not promiscuous; rather they recognize a defined sequence that we designate the conserved chaperone-binding domain (CCBD) sequence [(LMIF)1XXX(IV)5XX(IV)8X(N)10]. This sequence is the first defined amino acid sequence to be identified for any interspecies bacterial secretion system, i.e., a system that delivers proteins directly into eukaryotic cells. This sequence provides a new means to identify substrates of type III secretion systems. Indeed, using a pattern search algorithm for the CCBD sequence, we have identified the first two probable effectors from an endosymbiont, Sodalis glossinidius

Discovery of Globular Clusters in the Proto-Spiral NGC2915: Implications for Hierarchical Galaxy Evolution

We have discovered three globular clusters beyond the Holmberg radius in Hubble Space Telescope Advanced Camera for Surveys images of the gas-rich dark matter dominated blue compact dwarf galaxy NGC2915. The clusters, all of which start to resolve into stars, have M_{V606} = -8.9 to -9.8 mag, significantly brighter than the peak of the luminosity function of Milky Way globular clusters. Their colors suggest a metallicity [Fe/H] ~ -1.9 dex, typical of metal-poor Galactic globular clusters. The specific frequency of clusters is at a minimum normal, compared to spiral galaxies. However, since only a small portion of the system has been surveyed it is more likely that the luminosity and mass normalized cluster content is higher, like that seen in elliptical galaxies and galaxy clusters. This suggests that NGC2915 resembles a key phase in the early hierarchical assembly of galaxies - the epoch when much of the old stellar population has formed, but little of the stellar disk. Depending on the subsequent interaction history, such systems could go on to build-up larger elliptical galaxies, evolve into normal spirals, or in rare circumstances remain suspended in their development to become systems like NGC2915.Comment: ApJ Letters accepted; 6 pages, 2 figures, 3 table

The SDSS-IV extended Baryon Oscillation Spectroscopic Survey: selecting emission line galaxies using the Fisher discriminant

We present a new selection technique of producing spectroscopic target catalogues for massive spectroscopic surveys for cosmology. This work was conducted in the context of the extended Baryon Oscillation Spectroscopic Survey (eBOSS), which will use ~200 000 emission line galaxies (ELGs) at 0.6<zspec<1.0 to obtain a precise baryon acoustic oscillation measurement. Our proposed selection technique is based on optical and near-infrared broad-band filter photometry. We used a training sample to define a quantity, the Fisher discriminant (linear combination of colours), which correlates best with the desired properties of the target: redshift and [OII] flux. The proposed selections are simply done by applying a cut on magnitudes and this Fisher discriminant. We used public data and dedicated SDSS spectroscopy to quantify the redshift distribution and [OII] flux of our ELG target selections. We demonstrate that two of our selections fulfil the initial eBOSS/ELG redshift requirements: for a target density of 180 deg^2, ~70% of the selected objects have 0.6<zspec<1.0 and only ~1% of those galaxies in the range 0.6<zspec<1.0 are expected to have a catastrophic zspec estimate. Additionally, the stacked spectra and stacked deep images for those two selections show characteristic features of star-forming galaxies. The proposed approach using the Fisher discriminant could, however, be used to efficiently select other galaxy populations, based on multi-band photometry, providing that spectroscopic information is available. This technique could thus be useful for other future massive spectroscopic surveys such as PFS, DESI, and 4MOST.Comment: Version published in A&

Internal Color Properties of Resolved Spheroids in the Deep HST/ACS field of UGC 10214

(Abridged) We study the internal color properties of a morphologically selected sample of spheroidal galaxies taken from HST/ACS ERO program of UGC 10214 (``The Tadpole''). By taking advantage of the unprecedented high resolution of the ACS in this very deep dataset we are able to characterize spheroids at sub-arcseconds scales. Using the V_606W and I_814W bands, we construct V-I color maps and extract color gradients for a sample of spheroids at I_814W < 24 mag. We investigate the existence of a population of morphologically classified spheroids which show extreme variation in their internal color properties similar to the ones reported in the HDFs. These are displayed as blue cores and inverse color gradients with respect to those accounted from metallicity variations. Following the same analysis we find a similar fraction of early-type systems (~30%-40%) that show non-homologous internal colors, suggestive of recent star formation activity. We present two statistics to quantify the internal color variation in galaxies and for tracing blue cores, from which we estimate the fraction of non-homogeneous to homogeneous internal colors as a function of redshift up to z<1.2. We find that it can be described as about constant as a function of redshift, with a small increase with redshift for the fraction of spheroids that present strong color dispersions. The implications of a constant fraction at all redshifts suggests the existence of a relatively permanent population of evolving spheroids up to z~1. We discuss the implications of this in the context of spheroidal formation.Comment: Fixed URL for high resolution version. 13 Pages, 10 Figures. Accepted for Publication in ApJ. Sep 1st issue. Higher resolution version and complete table3B at http://acs.pha.jhu.edu/~felipe/e-prints/Tadpol

Star Formation at z~6: i-dropouts in the ACS GTO fields

Using an i-z dropout criterion, we determine the space density of z~6 galaxies from two deep ACS GTO fields with deep optical-IR imaging. A total of 23 objects are found over 46 arcmin^2, or ~0.5 objects/arcmin^2 down to z~27.3 (6 sigma; all AB mag) (including one probable z~6 AGN). Combining deep ISAAC data for our RDCS1252-2927 field (J~25.7 and Ks~25.0 (5 sigma)) and NICMOS data for the HDF North (JH~27.3 (5 sigma)), we verify that these dropouts have flat spectral slopes. i-dropouts in our sample range in luminosity from ~1.5 L* (z~25.6) to ~0.3 L* (z~27.3) with the exception of one very bright candidate at z~24.2. The half-light radii vary from 0.09" to 0.29", or 0.5 kpc to 1.7 kpc. We derive the z~6 rest-frame UV luminosity density using three different procedures, each utilizing simulations based on a CDF South V dropout sample. First, we compare our findings with a no-evolution projection of this V-dropout sample. We find 23+/-25% more i-dropouts than we predict. Adopting previous results to z~5, this works out to a 20+/-29% drop in the luminosity density from z~3 to z~6. Second, we use these same V-dropout simulations to derive a selection function for our i-dropout sample and compute the UV-luminosity density (7.2+/-2.5 x 10^25 ergs/s/Hz/Mpc^3 down to z~27). We find a 39+/-21% drop over the same redshift range. This is our preferred value and suggests a star formation rate of 0.0090+/-0.0031 M_sol/yr/Mpc^3 to z~27, or ~0.036+/- 0.012 M_sol/yr/Mpc^3 extrapolating the LF to the faint limit. Third, we follow a very similar procedure, but assume no incompleteness, finding a luminosity density which is ~2-3X lower. This final estimate constitutes a lower limit. All three estimates are within the canonical range of luminosity densities necessary for reionization of the universe at this epoch. (abridged)Comment: 36 pages, 13 figures, 2 tables, accepted for publication in ApJ, postscript version with high-resolution figures can be downloaded at http://www.ucolick.org/~bouwens/idropout.p

The Transformation of Cluster Galaxies at Intermeidate Redshift

We combine imaging data from the Advanced Camera for Surveys (ACS) with VLT/FORS optical spectroscopy to study the properties of star-forming galaxies in the z=0.837 cluster CL0152-1357. We have morphological information for 24 star-forming cluster galaxies, which range in morphology from late-type and irregular to compact early-type galaxies. We find that while most star-forming galaxies have $r_{625}-i_{775}$ colors bluer than 1.0, eight are in the red cluster sequence. Among the star-forming cluster population we find five compact early-type galaxies which have properties consistent with their identification as progenitors of dwarf elliptical galaxies. The spatial distribution of the star-forming cluster members is nonuniform. We find none within $R\sim 500$ Mpc of the cluster center, which is highly suggestive of an intracluster medium interaction. We derive star formation rates from [OII] $\lambda\lambda 3727$ line fluxes, and use these to compare the global star formation rate of CL0152-1357 to other clusters at low and intermediate redshifts. We find a tentative correlation between integrated star formation rates and $T_{X}$, in the sense that hotter clusters have lower integrated star formation rates. Additional data from clusters with low X-ray temperatures is needed to confirm this trend. We do not find a significant correlation with redshift, suggesting that evolution is either weak or absent between z=0.2-0.8.Comment: ApJ accepte

The Luminosity Function of Early-Type Galaxies at z~0.75

We measure the luminosity function of morphologically selected E/S0 galaxies from $z=0.5$ to $z=1.0$ using deep high resolution Advanced Camera for Surveys imaging data. Our analysis covers an area of 48\Box\arcmin (8$\times$ the area of the HDF-N) and extends 2 magnitudes deeper ($I\sim24$ mag) than was possible in the Deep Groth Strip Survey (DGSS). At $0.5<z<0.75$, we find $M_B^*-5\log h_{0.7}=-21.1\pm0.3$ and $\alpha=-0.53\pm0.2$, and at $0.75<z<1.0$, we find $M_B^*-5\log h_{0.7}=-21.4\pm0.2$. These luminosity functions are similar in both shape and number density to the luminosity function using morphological selection (e.g., DGSS), but are much steeper than the luminosity functions of samples selected using morphological proxies like the color or spectral energy distribution (e.g., CFRS, CADIS, or COMBO-17). The difference is due to the `blue', $(U-V)_0<1.7$, E/S0 galaxies, which make up to $\sim30$ of the sample at all magnitudes and an increasing proportion of faint galaxies. We thereby demonstrate the need for {\it both morphological and structural information} to constrain the evolution of galaxies. We find that the `blue' E/S0 galaxies have the same average sizes and Sersic parameters as the `red', $(U-V)_0>1.7$, E/S0 galaxies at brighter luminosities ($M_B<-20.1$), but are increasingly different at fainter magnitudes where `blue' galaxies are both smaller and have lower Sersic parameters. Fits of the colors to stellar population models suggest that most E/S0 galaxies have short star-formation time scales ($\tau<1$ Gyr), and that galaxies have formed at an increasing rate from $z\sim8$ until $z\sim2$ after which there has been a gradual decline.Comment: 39 pages, 21 figures, accepted in A